Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein clpb | BerOc1_03103 | Not Available | Positive | 3400877 - 3403474 | 96392.6 |
| arsenate-mycothiol transferase arsc2 | BerOc1_03104 | Not Available | Positive | 3403674 - 3404147 | 17640.2 |
| bicyclomycin resistance protein | BerOc1_03105 | Not Available | Positive | 3404339 - 3405493 | 41382.1 |
| putative hydrolase | BerOc1_03106 | Not Available | Negative | 3405571 - 3406545 | 36196.3 |
| aminopeptidase 2 | BerOc1_03107 | Not Available | Positive | 3406676 - 3407881 | 45041.7 |
| photosystem i assembly protein ycf3 | BerOc1_03108 | Not Available | Positive | 3407987 - 3409465 | 55580.4 |
| protein grpe | BerOc1_03109 | Not Available | Positive | 3409624 - 3410244 | 22600.9 |
| chaperone protein dnak | BerOc1_03110 | Not Available | Positive | 3410350 - 3412263 | 68840.6 |
| chemotaxis protein chew | BerOc1_03111 | Not Available | Negative | 3412334 - 3412828 | 17749.7 |
| methyl-accepting chemotaxis protein i | BerOc1_03112 | Not Available | Negative | 3412839 - 3414815 | 70511.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
