Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate 2-methyltransferase | BerOc1_02993 | Not Available | Negative | 3287583 - 3288671 | 39628.1 |
| putative acetolactate synthase large subunit ilvx | BerOc1_02994 | Not Available | Negative | 3288812 - 3290404 | 55110.0 |
| isocitrate dehydrogenase | BerOc1_02995 | Not Available | Negative | 3290696 - 3291838 | 40655.9 |
| nad-dependent protein deacylase | BerOc1_02996 | Not Available | Positive | 3291983 - 3292729 | 27210.8 |
| tryptophan synthase beta chain | BerOc1_02997 | Not Available | Positive | 3293023 - 3294369 | 49397.5 |
| meta domain protein | BerOc1_02998 | Not Available | Positive | 3294497 - 3294970 | 17281.4 |
| putative lipoprotein ybbd precursor | BerOc1_02999 | Not Available | Negative | 3295150 - 3296247 | 39292.6 |
| rhomboid family protein | BerOc1_03000 | Not Available | Positive | 3296362 - 3297387 | 36670.4 |
| high-affinity zinc uptake system atp-binding protein znuc | BerOc1_03001 | Not Available | Positive | 3297459 - 3298271 | 28952.1 |
| high-affinity zinc uptake system membrane protein znub | BerOc1_03002 | Not Available | Positive | 3298268 - 3299071 | 28353.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
