Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_02983 | Not Available | Negative | 3280917 - 3281258 | 12782.7 |
| Baseplate wedge subunit | BerOc1_02984 | Not Available | Positive | 3281289 - 3281723 | 15933.9 |
| Baseplate j/gp47 family protein | BerOc1_02985 | Not Available | Positive | 3281701 - 3282891 | 42495.4 |
| Tail protein i | BerOc1_02986 | Not Available | Positive | 3282895 - 3283539 | 23731.5 |
| Putative tail-collar fiber protein | BerOc1_02987 | Not Available | Positive | 3283551 - 3284918 | 47875.9 |
| Tail fiber protein | BerOc1_02988 | Not Available | Positive | 3284921 - 3285271 | 12993.2 |
| hypothetical protein | BerOc1_02989 | Not Available | Positive | 3285662 - 3286141 | 17825.8 |
| Attr | Not Available | Not Available | Positive | 3285812 - 3285824 | Not Available |
| Putative quaternary ammonium compound-resistance protein | BerOc1_02990 | Not Available | Positive | 3286164 - 3286493 | 11409.6 |
| hydrogenase assembly chaperone | BerOc1_02991 | Not Available | Negative | 3286711 - 3286968 | 9335.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
