Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_02944 | Not Available | Negative | 3245263 - 3245844 | 21068.2 |
| pyridoxamine 5'-phosphate oxidase | BerOc1_02945 | Not Available | Negative | 3245854 - 3246303 | 16242.6 |
| glycosyl transferase family 2 | BerOc1_02946 | Not Available | Positive | 3246362 - 3247066 | 25394.7 |
| hypothetical protein | BerOc1_02947 | Not Available | Positive | 3247066 - 3247749 | 24232.0 |
| na(+)/h(+) antiporter nhaa | BerOc1_02948 | Not Available | Positive | 3247836 - 3249203 | 48187.8 |
| hypothetical protein | BerOc1_02949 | Not Available | Negative | 3249279 - 3250517 | 44645.9 |
| hypothetical protein | BerOc1_02950 | Not Available | Negative | 3250918 - 3251187 | 10043.9 |
| trna modification gtpase mnme | BerOc1_02951 | Not Available | Negative | 3251190 - 3252581 | 49280.7 |
| r3h domain protein | BerOc1_02952 | Not Available | Negative | 3252800 - 3253873 | 40500.8 |
| membrane protein insertase yidc | BerOc1_02953 | Not Available | Negative | 3253919 - 3255586 | 61693.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
