Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25 | BerOc1_02884 | Not Available | Negative | 3180846 - 3181484 | 23151.7 |
| ribose-phosphate pyrophosphokinase | BerOc1_02885 | Not Available | Negative | 3181583 - 3182521 | 33648.8 |
| Trna-gln | Not Available | Not Available | Positive | 3182555 - 3182629 | Not Available |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | BerOc1_02887 | Not Available | Negative | 3182961 - 3183827 | 31031.0 |
| putative periplasmic serine endoprotease degp-like precursor | BerOc1_02888 | Not Available | Negative | 3183880 - 3185277 | 49260.9 |
| Trna-arg | Not Available | Not Available | Positive | 3185512 - 3185588 | Not Available |
| hypothetical protein | BerOc1_02890 | Not Available | Positive | 3185698 - 3186093 | 14468.1 |
| hypothetical protein | BerOc1_02891 | Not Available | Negative | 3186197 - 3186919 | 26184.4 |
| non-motile and phage-resistance protein | BerOc1_02892 | Not Available | Negative | 3187108 - 3189678 | 96384.0 |
| dead-box atp-dependent rna helicase csha | BerOc1_02893 | Not Available | Negative | 3189784 - 3191439 | 60272.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
