Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator puur | BerOc1_02844 | Not Available | Positive | 3134107 - 3134655 | 20765.1 |
| putative competence-damage inducible protein | BerOc1_02845 | Not Available | Positive | 3134663 - 3135682 | 36255.4 |
| xanthine permease xanp | BerOc1_02846 | Not Available | Positive | 3135847 - 3137241 | 48699.1 |
| hydrogenase isoenzymes nickel incorporation protein hypb | BerOc1_02847 | Not Available | Negative | 3137466 - 3138134 | 24222.8 |
| hydrogenase nickel incorporation protein hypa | BerOc1_02848 | Not Available | Negative | 3138139 - 3138480 | 11879.0 |
| bicarbonate transport atp-binding protein cmpd | BerOc1_02849 | Not Available | Negative | 3138492 - 3139400 | 33732.8 |
| putative aliphatic sulfonates transport permease protein ssuc | BerOc1_02850 | Not Available | Negative | 3139397 - 3140464 | 39752.5 |
| putative aliphatic sulfonates-binding protein precursor | BerOc1_02851 | Not Available | Negative | 3140525 - 3141496 | 35026.1 |
| hypothetical protein | BerOc1_02852 | Not Available | Negative | 3141523 - 3142371 | 30622.2 |
| proclavaminate amidinohydrolase | BerOc1_02853 | Not Available | Negative | 3142381 - 3143535 | 42350.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
