Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_00241 | Not Available | Positive | 242669 - 243571 | 33644.0 |
| branched-chain-amino-acid aminotransferase | BerOc1_00242 | Not Available | Negative | 244000 - 244941 | 34687.2 |
| aspartate-semialdehyde dehydrogenase | BerOc1_00243 | Not Available | Negative | 244952 - 245977 | 37354.9 |
| 5,10-methylenetetrahydrofolate reductase | BerOc1_00244 | Not Available | Negative | 245996 - 246868 | 31758.3 |
| ctp pyrophosphohydrolase | BerOc1_00245 | Not Available | Negative | 246992 - 247381 | 14730.5 |
| putative abc transporter atp-binding protein yhes | BerOc1_00246 | Not Available | Negative | 247378 - 249351 | 74063.3 |
| giy-yig nuclease superfamily protein | BerOc1_00247 | Not Available | Positive | 249395 - 249727 | 12217.8 |
| hypothetical protein | BerOc1_00248 | Not Available | Positive | 249830 - 250078 | 9516.72 |
| hypothetical protein | BerOc1_00249 | Not Available | Positive | 250075 - 250530 | 17357.1 |
| 3-isopropylmalate dehydrogenase | BerOc1_00250 | Not Available | Negative | 250605 - 251672 | 38178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
