Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein 3 | BerOc1_02744 | Not Available | Negative | 2996319 - 2997512 | 41551.6 |
| flagellar hook-associated protein 1 | BerOc1_02745 | Not Available | Negative | 2997529 - 2999541 | 70054.5 |
| flagellar hook protein flge | BerOc1_02746 | Not Available | Negative | 2999566 - 3001116 | 54134.7 |
| basal-body rod modification protein flgd | BerOc1_02747 | Not Available | Negative | 3001147 - 3001824 | 24039.9 |
| ecf rna polymerase sigma factor sigk | BerOc1_02748 | Not Available | Negative | 3001821 - 3002405 | 22342.7 |
| flagellar filament 33 kda core protein | BerOc1_02749 | Not Available | Negative | 3002736 - 3003596 | 29849.0 |
| response regulator arlr | BerOc1_02750 | Not Available | Positive | 3003854 - 3004564 | 25710.3 |
| colicin i receptor precursor | BerOc1_02751 | Not Available | Positive | 3004565 - 3006472 | 70174.4 |
| hypothetical protein | BerOc1_02752 | Not Available | Positive | 3006472 - 3007011 | 19148.5 |
| aerobic respiration control sensor protein arcb | BerOc1_02753 | Not Available | Positive | 3007004 - 3008503 | 54581.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
