Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-trna hydrolase arfb | BerOc1_02694 | Not Available | Positive | 2942444 - 2942872 | 16430.0 |
| hypothetical protein | BerOc1_02695 | Not Available | Negative | 2942869 - 2943861 | 37361.1 |
| zeta toxin | BerOc1_02696 | Not Available | Negative | 2943858 - 2945069 | 45659.9 |
| asch domain protein | BerOc1_02697 | Not Available | Negative | 2945349 - 2945762 | 15256.3 |
| ribonuclease d | BerOc1_02698 | Not Available | Negative | 2945884 - 2946498 | 22846.6 |
| hypothetical protein | BerOc1_02699 | Not Available | Negative | 2946760 - 2947440 | 25085.8 |
| hypothetical protein | BerOc1_02700 | Not Available | Negative | 2947458 - 2948204 | 28560.1 |
| prolipoprotein diacylglyceryl transferase | BerOc1_02701 | Not Available | Positive | 2948325 - 2949107 | 29130.2 |
| glutamine cyclotransferase | BerOc1_02702 | Not Available | Negative | 2949099 - 2949884 | 28862.8 |
| hth-type transcriptional repressor nics | BerOc1_02703 | Not Available | Negative | 2950006 - 2950638 | 23480.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
