Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BerOc1_02684 | Not Available | Positive | 2930974 - 2932023 | 37346.4 |
| proline--trna ligase | BerOc1_02685 | Not Available | Positive | 2932024 - 2933766 | 64396.0 |
| homoserine/homoserine lactone efflux protein | BerOc1_02686 | Not Available | Positive | 2934121 - 2934732 | 21229.7 |
| exodeoxyribonuclease 7 large subunit | BerOc1_02687 | Not Available | Positive | 2934898 - 2936388 | 53542.5 |
| murein dd-endopeptidase mepm | BerOc1_02688 | Not Available | Positive | 2936395 - 2937444 | 37733.3 |
| murein dd-endopeptidase mepm | BerOc1_02689 | Not Available | Positive | 2937465 - 2938385 | 33460.6 |
| exodeoxyribonuclease 7 small subunit | BerOc1_02690 | Not Available | Positive | 2938517 - 2938771 | 9565.32 |
| farnesyl diphosphate synthase | BerOc1_02691 | Not Available | Positive | 2938768 - 2939661 | 31681.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BerOc1_02692 | Not Available | Positive | 2939683 - 2941581 | 68618.5 |
| hypothetical protein | BerOc1_02693 | Not Available | Negative | 2941852 - 2942340 | 18006.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
