Pseudodesulfovibrio hydrargyri str. BerOc1

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Pseudodesulfovibrio

Description

Pseudodesulfovibrio hydrargyri str. BerOc1 is a Gram-negative, curved to spiral-shaped bacterium. This organism is notable for possessing a single replicon, which is a characteristic that can influence its replication and genetic stability. The strain is classified under the genus Pseudodesulfovibrio, which suggests a role in the sulfur cycle, particularly in environments where sulfate-reducing bacteria are prevalent. The genomic information for Pseudodesulfovibrio hydrargyri str. BerOc1 can be accessed through the accession number LKAQ00000000.1. This data provides insights into its genetic makeup, potentially revealing pathways and mechanisms that are important for its survival and metabolic processes. Ecologically, the traits of Pseudodesulfovibrio hydrargyri str. BerOc1 suggest it may play a significant role in biogeochemical cycles, particularly in the degradation of organic matter in anaerobic environments. Its curved/spiral morphology may enhance its motility and adaptability in complex microbial communities. Understanding this organism's physiology and ecology can contribute to broader insights into microbial interactions in diverse environments, especially those impacted by mercury, as indicated by its name "hydrargyri," which refers to mercury in Latin. Overall, Pseudodesulfovibrio hydrargyri str. BerOc1 exemplifies the intricate relationships between microbial life and the biogeochemical processes that shape ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPseudodesulfovibrio
SpeciesPseudodesulfovibrio hydrargyri
StrainBerOc1

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudodesulfovibrio hydrargyri strain BerOc1 BerOc1_contig000005,

Gene Summary

Adenine Count

737881 bp

Thymine Count

739754 bp

Guanine Count

1301445 bp

Cytosine Count

1302029 bp

Genome Length

4081579 bp

Protein-coding Genes

3668 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate hydrogenlyase subunit 7BerOc1_02674Not AvailablePositive2922268 - 292266313925.0
respiratory-chain nadh dehydrogenase, 30 kd subunitBerOc1_02675Not AvailablePositive2922682 - 292304713722.6
formate hydrogenlyase subunit 5 precursorBerOc1_02676Not AvailablePositive2923057 - 292413640225.9
nad(p)h-quinone oxidoreductase subunit iBerOc1_02677Not AvailablePositive2924145 - 292457316102.5
hypothetical proteinBerOc1_02678Not AvailableNegative2924636 - 292602751225.5
hypothetical proteinBerOc1_02679Not AvailableNegative2926041 - 292683229173.0
fmde, molybdenum formylmethanofuran dehydrogenase operonBerOc1_02680Not AvailableNegative2927073 - 292761219805.9
putative siderophore transport system atp-binding protein yusvBerOc1_02681Not AvailableNegative2927636 - 292839127816.3
hemin transport system permease protein hmuuBerOc1_02682Not AvailableNegative2928388 - 292945837088.2
periplasmic binding proteinBerOc1_02683Not AvailableNegative2929459 - 293056540771.0

Displaying genes 2701 – 2710 of 3747 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.