Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acylphosphatase | BerOc1_02654 | Not Available | Negative | 2905815 - 2906087 | 10037.0 |
| hypothetical protein | BerOc1_02655 | Not Available | Positive | 2906262 - 2906873 | 22494.1 |
| hypothetical protein | BerOc1_02656 | Not Available | Positive | 2907035 - 2907283 | 9046.16 |
| hypothetical protein | BerOc1_02657 | Not Available | Negative | 2907352 - 2907855 | 19900.6 |
| hypothetical protein | BerOc1_02658 | Not Available | Positive | 2908031 - 2908141 | 4377.48 |
| zinc ribbon domain protein | BerOc1_02659 | Not Available | Positive | 2908279 - 2908596 | 10841.2 |
| adenylosuccinate lyase | BerOc1_02660 | Not Available | Positive | 2908725 - 2910023 | 48854.4 |
| orotate phosphoribosyltransferase | BerOc1_02661 | Not Available | Positive | 2910025 - 2910582 | 20248.7 |
| l,d-transpeptidase catalytic domain | BerOc1_02662 | Not Available | Positive | 2910643 - 2911902 | 47220.9 |
| hypothetical protein | BerOc1_02663 | Not Available | Positive | 2911899 - 2912609 | 27106.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
