Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial type ii secretion system protein f domain protein | BerOc1_02624 | Not Available | Positive | 2867783 - 2868739 | 34062.3 |
| tpr repeat-containing protein yrrb | BerOc1_02625 | Not Available | Positive | 2868763 - 2870124 | 49608.6 |
| blue-light-activated protein | BerOc1_02626 | Not Available | Positive | 2870293 - 2872440 | 78977.5 |
| putative glycerophosphoryl diester phosphodiesterase 1 | BerOc1_02627 | Not Available | Positive | 2872592 - 2873830 | 44896.7 |
| hypothetical protein | BerOc1_02628 | Not Available | Positive | 2874026 - 2874832 | 29445.9 |
| putative binding protein component of abc iron transporter precursor | BerOc1_02629 | Not Available | Positive | 2874882 - 2875910 | 37449.8 |
| spermidine/putrescine import atp-binding protein pota | BerOc1_02630 | Not Available | Positive | 2875924 - 2876979 | 38313.9 |
| spermidine/putrescine transport system permease protein potb | BerOc1_02631 | Not Available | Positive | 2876982 - 2878682 | 60987.2 |
| cyclic di-gmp phosphodiesterase response regulator rpfg | BerOc1_02632 | Not Available | Negative | 2878679 - 2879941 | 47066.1 |
| hypothetical protein | BerOc1_02633 | Not Available | Positive | 2880227 - 2880715 | 18043.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
