Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ycei | BerOc1_02564 | Not Available | Negative | 2805778 - 2806380 | 21697.9 |
| hypothetical protein | BerOc1_02565 | Not Available | Negative | 2806469 - 2806759 | 10590.1 |
| magnesium transport protein cora | BerOc1_02566 | Not Available | Negative | 2806783 - 2807847 | 40761.6 |
| mechanosensitive ion channel | BerOc1_02567 | Not Available | Positive | 2807986 - 2809059 | 39373.6 |
| hypothetical protein | BerOc1_02568 | Not Available | Positive | 2809179 - 2809352 | 6203.13 |
| aspartoacylase | BerOc1_02569 | Not Available | Negative | 2809379 - 2810404 | 36995.9 |
| ribosomal protein s6 modification protein | BerOc1_02570 | Not Available | Negative | 2810437 - 2811342 | 32264.4 |
| hypothetical protein | BerOc1_02571 | Not Available | Negative | 2811339 - 2811806 | 17112.8 |
| citrate transporter | BerOc1_02572 | Not Available | Negative | 2811916 - 2813751 | 64955.9 |
| sensory/regulatory protein rpfc | BerOc1_02573 | Not Available | Positive | 2813953 - 2817102 | 117088.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
