Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane abc transporter permease protein ydcv | BerOc1_02554 | Not Available | Negative | 2794498 - 2795328 | 30006.4 |
| putrescine transport system permease protein poth | BerOc1_02555 | Not Available | Negative | 2795347 - 2796195 | 31539.5 |
| hypothetical protein | BerOc1_02556 | Not Available | Negative | 2796257 - 2797552 | 47697.2 |
| spermidine/putrescine import atp-binding protein pota | BerOc1_02557 | Not Available | Negative | 2797573 - 2798682 | 40296.2 |
| hypothetical protein | BerOc1_02558 | Not Available | Negative | 2798675 - 2798833 | 5554.43 |
| hth-type transcriptional regulator lutr | BerOc1_02559 | Not Available | Positive | 2799178 - 2799867 | 24998.9 |
| cggc domain protein | BerOc1_02560 | Not Available | Positive | 2799954 - 2800400 | 16356.7 |
| carbonic anhydrase | BerOc1_02561 | Not Available | Positive | 2800580 - 2801251 | 25655.9 |
| hypothetical protein | BerOc1_02562 | Not Available | Positive | 2801725 - 2802255 | 20803.1 |
| putative fad-linked oxidoreductase | BerOc1_02563 | Not Available | Positive | 2802464 - 2805286 | 102923.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
