Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate transport transcriptional regulatory protein dctd | BerOc1_02544 | Not Available | Negative | 2779704 - 2781053 | 49734.3 |
| c4-dicarboxylate transport sensor protein dctb | BerOc1_02545 | Not Available | Negative | 2781053 - 2782834 | 67100.6 |
| thiamine biosynthesis lipoprotein apbe precursor | BerOc1_02546 | Not Available | Negative | 2783066 - 2785249 | 75808.1 |
| methyl-accepting chemotaxis protein i | BerOc1_02547 | Not Available | Positive | 2785503 - 2788277 | 99041.7 |
| putative inorganic polyphosphate/atp-nad kinase | BerOc1_02548 | Not Available | Negative | 2788284 - 2789057 | 28376.3 |
| hypothetical protein | BerOc1_02549 | Not Available | Negative | 2789216 - 2789995 | 28666.3 |
| ketol-acid reductoisomerase | BerOc1_02550 | Not Available | Negative | 2790092 - 2791087 | 37026.9 |
| putative hydrolase | BerOc1_02551 | Not Available | Negative | 2791135 - 2792391 | 45490.8 |
| allantoinase | BerOc1_02552 | Not Available | Negative | 2792395 - 2793774 | 50211.5 |
| asp/glu/hydantoin racemase | BerOc1_02553 | Not Available | Negative | 2793767 - 2794486 | 24507.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
