Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxygluconate permease | BerOc1_02504 | Not Available | Positive | 2728294 - 2729256 | 32883.2 |
| altronate dehydratase | BerOc1_02505 | Not Available | Positive | 2729346 - 2729624 | 10017.0 |
| (2r)-sulfolactate sulfo-lyase subunit beta precursor | BerOc1_02506 | Not Available | Positive | 2729637 - 2730797 | 40125.1 |
| nickel import atp-binding protein nike | BerOc1_02507 | Not Available | Negative | 2730930 - 2731784 | 31032.8 |
| nickel import atp-binding protein nikd | BerOc1_02508 | Not Available | Negative | 2731781 - 2732650 | 30749.5 |
| nickel transport system permease protein nikc | BerOc1_02509 | Not Available | Negative | 2732650 - 2733534 | 31479.4 |
| nickel transport system permease protein nikb | BerOc1_02510 | Not Available | Negative | 2733531 - 2734472 | 34710.6 |
| nickel-binding periplasmic protein precursor | BerOc1_02511 | Not Available | Negative | 2734485 - 2736137 | 61556.8 |
| chromosome partition protein smc | BerOc1_02512 | Not Available | Negative | 2736543 - 2737454 | 34548.3 |
| nadh oxidase | BerOc1_02513 | Not Available | Negative | 2737685 - 2738680 | 36494.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
