Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fg-gap repeat protein | BerOc1_02484 | Not Available | Negative | 2702595 - 2704244 | 60655.4 |
| ribosomal rna small subunit methyltransferase f | BerOc1_02485 | Not Available | Positive | 2704454 - 2705737 | 45736.8 |
| Trna-val | Not Available | Not Available | Positive | 2705920 - 2705995 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2706041 - 2706117 | Not Available |
| hypothetical protein | BerOc1_02488 | Not Available | Positive | 2706547 - 2707548 | 37556.8 |
| hypothetical protein | BerOc1_02489 | Not Available | Negative | 2707961 - 2708380 | 15948.4 |
| methyl-accepting chemotaxis protein iii | BerOc1_02490 | Not Available | Negative | 2708755 - 2710359 | 56531.7 |
| Trna-asp | Not Available | Not Available | Positive | 2710853 - 2710929 | Not Available |
| ribonuclease j 1 | BerOc1_02492 | Not Available | Negative | 2711206 - 2712495 | 48353.6 |
| hypothetical protein | BerOc1_02493 | Not Available | Negative | 2712675 - 2713478 | 29766.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
