Pseudodesulfovibrio hydrargyri str. BerOc1

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Pseudodesulfovibrio

Description

Pseudodesulfovibrio hydrargyri str. BerOc1 is a Gram-negative, curved to spiral-shaped bacterium. This organism is notable for possessing a single replicon, which is a characteristic that can influence its replication and genetic stability. The strain is classified under the genus Pseudodesulfovibrio, which suggests a role in the sulfur cycle, particularly in environments where sulfate-reducing bacteria are prevalent. The genomic information for Pseudodesulfovibrio hydrargyri str. BerOc1 can be accessed through the accession number LKAQ00000000.1. This data provides insights into its genetic makeup, potentially revealing pathways and mechanisms that are important for its survival and metabolic processes. Ecologically, the traits of Pseudodesulfovibrio hydrargyri str. BerOc1 suggest it may play a significant role in biogeochemical cycles, particularly in the degradation of organic matter in anaerobic environments. Its curved/spiral morphology may enhance its motility and adaptability in complex microbial communities. Understanding this organism's physiology and ecology can contribute to broader insights into microbial interactions in diverse environments, especially those impacted by mercury, as indicated by its name "hydrargyri," which refers to mercury in Latin. Overall, Pseudodesulfovibrio hydrargyri str. BerOc1 exemplifies the intricate relationships between microbial life and the biogeochemical processes that shape ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPseudodesulfovibrio
SpeciesPseudodesulfovibrio hydrargyri
StrainBerOc1

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudodesulfovibrio hydrargyri strain BerOc1 BerOc1_contig000005,

Gene Summary

Adenine Count

737881 bp

Thymine Count

739754 bp

Guanine Count

1301445 bp

Cytosine Count

1302029 bp

Genome Length

4081579 bp

Protein-coding Genes

3668 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobyrinic acid a,c-diamide synthaseBerOc1_02414Not AvailablePositive2626830 - 262821550154.2
udp-2-acetamido-2-deoxy-3-oxo-d-glucuronate aminotransferaseBerOc1_02415Not AvailablePositive2628292 - 262942541035.3
hypothetical proteinBerOc1_02416Not AvailablePositive2629431 - 262978112427.0
peptidyl-prolyl cis-trans isomerase cyp18BerOc1_02417Not AvailablePositive2629886 - 263038018247.5
hypothetical proteinBerOc1_02418Not AvailableNegative2630489 - 263110622620.4
high-affinity branched-chain amino acid transport atp-binding protein livfBerOc1_02419Not AvailableNegative2631285 - 263202226943.8
lipopolysaccharide export system atp-binding protein lptbBerOc1_02420Not AvailableNegative2632019 - 263278628427.7
leucine/isoleucine/valine transporter permease subunitBerOc1_02421Not AvailableNegative2632797 - 263389139774.4
high-affinity branched-chain amino acid transport system permease protein livhBerOc1_02422Not AvailableNegative2633908 - 263481932988.1
leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursorBerOc1_02423Not AvailableNegative2634942 - 263611742226.2

Displaying genes 2441 – 2450 of 3747 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.