Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid a,c-diamide synthase | BerOc1_02414 | Not Available | Positive | 2626830 - 2628215 | 50154.2 |
| udp-2-acetamido-2-deoxy-3-oxo-d-glucuronate aminotransferase | BerOc1_02415 | Not Available | Positive | 2628292 - 2629425 | 41035.3 |
| hypothetical protein | BerOc1_02416 | Not Available | Positive | 2629431 - 2629781 | 12427.0 |
| peptidyl-prolyl cis-trans isomerase cyp18 | BerOc1_02417 | Not Available | Positive | 2629886 - 2630380 | 18247.5 |
| hypothetical protein | BerOc1_02418 | Not Available | Negative | 2630489 - 2631106 | 22620.4 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | BerOc1_02419 | Not Available | Negative | 2631285 - 2632022 | 26943.8 |
| lipopolysaccharide export system atp-binding protein lptb | BerOc1_02420 | Not Available | Negative | 2632019 - 2632786 | 28427.7 |
| leucine/isoleucine/valine transporter permease subunit | BerOc1_02421 | Not Available | Negative | 2632797 - 2633891 | 39774.4 |
| high-affinity branched-chain amino acid transport system permease protein livh | BerOc1_02422 | Not Available | Negative | 2633908 - 2634819 | 32988.1 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor | BerOc1_02423 | Not Available | Negative | 2634942 - 2636117 | 42226.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
