Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-l-rhamnonate aldolase | BerOc1_02405 | Not Available | Positive | 2618841 - 2619641 | 28249.8 |
| hypothetical protein | BerOc1_02406 | Not Available | Positive | 2619932 - 2620429 | 16964.9 |
| high-affinity zinc uptake system binding-protein znua precursor | BerOc1_02407 | Not Available | Positive | 2620612 - 2621532 | 33603.3 |
| Tmrna,resume consensus sequence (at 344): gccaggtgccggggactc | Not Available | Not Available | Positive | 2621182 - 2621685 | Not Available |
| ferric uptake regulation protein | BerOc1_02408 | Not Available | Positive | 2621554 - 2621985 | 15746.8 |
| hypothetical protein | BerOc1_02409 | Not Available | Negative | 2622630 - 2622884 | 10011.8 |
| flagellin n-methylase | BerOc1_02410 | Not Available | Negative | 2622896 - 2623564 | 24906.1 |
| sulfite reductase, dissimilatory-type subunit alpha | BerOc1_02411 | Not Available | Positive | 2623944 - 2625260 | 49159.3 |
| sulfite reductase, dissimilatory-type subunit beta | BerOc1_02412 | Not Available | Positive | 2625279 - 2626424 | 42545.1 |
| dissimilatory sulfite reductase d (dsrd) | BerOc1_02413 | Not Available | Positive | 2626493 - 2626741 | 9186.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
