Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dehydrogenase 1 | BerOc1_02352 | Not Available | Positive | 2559315 - 2560265 | 35365.4 |
| putative dmt superfamily transporter inner membrane protein | BerOc1_02353 | Not Available | Positive | 2560366 - 2561259 | 31176.1 |
| kynurenine formamidase | BerOc1_02354 | Not Available | Negative | 2561436 - 2562251 | 28877.2 |
| phosphate acetyltransferase | BerOc1_02355 | Not Available | Negative | 2562907 - 2563971 | 38699.6 |
| succinyl-coa synthetase subunit alpha | BerOc1_02356 | Not Available | Negative | 2564060 - 2566168 | 75184.7 |
| ribonuclease 3 | BerOc1_02357 | Not Available | Positive | 2566184 - 2566867 | 25676.3 |
| flagellar filament 34.5 kda core protein | BerOc1_02358 | Not Available | Negative | 2566972 - 2567901 | 33060.2 |
| flagellar hook protein flge | BerOc1_02359 | Not Available | Negative | 2569142 - 2570818 | 58741.3 |
| basal-body rod modification protein flgd | BerOc1_02360 | Not Available | Negative | 2570890 - 2571714 | 29180.1 |
| flagellar hook-length control protein flik | BerOc1_02361 | Not Available | Negative | 2571727 - 2573496 | 64296.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
