Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coenzyme a synthetase | BerOc1_02242 | Not Available | Positive | 2429673 - 2431658 | 73640.3 |
| sialic acid trap transporter permease protein siat | BerOc1_02243 | Not Available | Negative | 2431813 - 2433135 | 47508.8 |
| tripartite atp-independent periplasmic transporter, dctq component | BerOc1_02244 | Not Available | Negative | 2433132 - 2433653 | 19940.0 |
| monocarboxylate 2-oxoacid-binding periplasmic protein precursor | BerOc1_02245 | Not Available | Negative | 2433746 - 2434795 | 39101.1 |
| vegetative catalase | BerOc1_02246 | Not Available | Positive | 2435317 - 2436831 | 56827.7 |
| diaminopimelate epimerase | BerOc1_02247 | Not Available | Negative | 2437330 - 2438181 | 30599.2 |
| hypothetical protein | BerOc1_02248 | Not Available | Negative | 2438269 - 2438640 | 14160.8 |
| hypothetical protein | BerOc1_02249 | Not Available | Positive | 2438774 - 2439025 | 9582.34 |
| ribonuclease bn | BerOc1_02250 | Not Available | Positive | 2439103 - 2439855 | 27768.3 |
| photosystem i assembly protein ycf3 | BerOc1_02251 | Not Available | Positive | 2439991 - 2441325 | 49435.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
