Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase a precursor | BerOc1_02232 | Not Available | Negative | 2420770 - 2421414 | 23361.5 |
| shikimate dehydrogenase | BerOc1_02233 | Not Available | Negative | 2421441 - 2422250 | 29102.8 |
| malonyl coa-acyl carrier protein transacylase | BerOc1_02234 | Not Available | Negative | 2422255 - 2423181 | 32674.3 |
| hypothetical protein | BerOc1_02235 | Not Available | Positive | 2423416 - 2423529 | 3440.44 |
| hit-like protein | BerOc1_02236 | Not Available | Positive | 2423857 - 2424282 | 15088.3 |
| integration host factor subunit alpha | BerOc1_02237 | Not Available | Positive | 2424313 - 2424597 | 10895.4 |
| rare lipoprotein a | BerOc1_02238 | Not Available | Negative | 2424662 - 2425426 | 26339.9 |
| serine/threonine-protein kinase pknl | BerOc1_02239 | Not Available | Positive | 2425824 - 2427209 | 50649.5 |
| hypothetical protein | BerOc1_02240 | Not Available | Negative | 2427835 - 2428845 | 38098.2 |
| hypothetical protein | BerOc1_02241 | Not Available | Negative | 2428867 - 2429031 | 6074.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
