Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide oxidoreductase resa | BerOc1_02212 | Not Available | Positive | 2401589 - 2402122 | 20252.3 |
| tat proofreading chaperone dmsd | BerOc1_02213 | Not Available | Negative | 2402119 - 2402736 | 21719.1 |
| copper-sensing transcriptional repressor csor | BerOc1_02214 | Not Available | Positive | 2402836 - 2403129 | 10904.3 |
| ef hand | BerOc1_02215 | Not Available | Positive | 2403151 - 2403408 | 9393.8 |
| gtpase era | BerOc1_02216 | Not Available | Negative | 2403487 - 2404395 | 33683.2 |
| hypothetical protein | BerOc1_02217 | Not Available | Negative | 2404399 - 2404818 | 16237.5 |
| hypothetical protein | BerOc1_02218 | Not Available | Positive | 2404956 - 2405609 | 23781.6 |
| radical sam superfamily protein | BerOc1_02219 | Not Available | Negative | 2405690 - 2407078 | 51367.1 |
| hypothetical protein | BerOc1_02220 | Not Available | Negative | 2407084 - 2407260 | 6518.66 |
| laccase domain protein yfih | BerOc1_02221 | Not Available | Negative | 2407334 - 2408098 | 28186.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
