Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_02142 | Not Available | Negative | 2328251 - 2328667 | 16120.2 |
| s-adenosylmethionine decarboxylase proenzyme precursor | BerOc1_02143 | Not Available | Positive | 2329065 - 2329472 | 14757.7 |
| spermidine synthase | BerOc1_02144 | Not Available | Positive | 2329454 - 2330395 | 34680.1 |
| hypothetical protein | BerOc1_02145 | Not Available | Negative | 2330649 - 2331074 | 16443.7 |
| hypothetical protein | BerOc1_02146 | Not Available | Negative | 2331081 - 2331629 | 21153.8 |
| 30s ribosomal protein s1 | BerOc1_02147 | Not Available | Positive | 2331989 - 2333854 | 68642.4 |
| putative signal peptide peptidase sppa | BerOc1_02148 | Not Available | Positive | 2333867 - 2334769 | 32384.4 |
| histidine protein kinase divj | BerOc1_02149 | Not Available | Negative | 2334892 - 2337186 | 83607.0 |
| hypothetical protein | BerOc1_02150 | Not Available | Negative | 2337290 - 2338168 | 31948.1 |
| cyclic di-gmp phosphodiesterase response regulator rpfg | BerOc1_02151 | Not Available | Negative | 2338361 - 2339134 | 28478.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
