Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_02082 | Not Available | Positive | 2261582 - 2262439 | 32693.2 |
| hypothetical protein | BerOc1_02083 | Not Available | Positive | 2262485 - 2263063 | 21253.3 |
| putative dmt superfamily transporter inner membrane protein | BerOc1_02084 | Not Available | Positive | 2263137 - 2264048 | 31095.0 |
| hypothetical protein | BerOc1_02085 | Not Available | Positive | 2264703 - 2265689 | 36132.5 |
| putative deoxyribonuclease ycfh | BerOc1_02086 | Not Available | Positive | 2265700 - 2266518 | 30618.4 |
| bacterial extracellular solute-binding protein, family 3 | BerOc1_02087 | Not Available | Positive | 2266605 - 2267432 | 30669.8 |
| eama-like transporter family protein | BerOc1_02088 | Not Available | Positive | 2267477 - 2268364 | 31756.3 |
| pilz domain protein | BerOc1_02089 | Not Available | Negative | 2268375 - 2268731 | 13275.0 |
| epoxyqueuosine reductase | BerOc1_02090 | Not Available | Positive | 2268861 - 2269694 | 30368.2 |
| fructose-1,6-bisphosphatase class 2 | BerOc1_02091 | Not Available | Negative | 2269921 - 2270904 | 35071.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
