Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-l-fucose synthase | BerOc1_02012 | Not Available | Positive | 2184801 - 2185739 | 34719.4 |
| putative glycosyltransferase epsj | BerOc1_02013 | Not Available | Positive | 2185815 - 2186651 | 31645.3 |
| hypothetical protein | BerOc1_02014 | Not Available | Positive | 2186639 - 2187583 | 35253.6 |
| oxygen-independent coproporphyrinogen-iii oxidase 2 | BerOc1_02015 | Not Available | Positive | 2187645 - 2188661 | 36938.5 |
| atrazine chlorohydrolase | BerOc1_02016 | Not Available | Positive | 2188911 - 2190005 | 39193.1 |
| aspartate carbamoyltransferase | BerOc1_02017 | Not Available | Positive | 2190028 - 2190957 | 33953.4 |
| dihydroorotase | BerOc1_02018 | Not Available | Positive | 2191206 - 2192489 | 46155.0 |
| poly(a) polymerase i | BerOc1_02019 | Not Available | Positive | 2192625 - 2193959 | 51133.2 |
| hypothetical protein | BerOc1_02020 | Not Available | Positive | 2194233 - 2195078 | 29810.6 |
| hth-type transcriptional regulator tdfr | BerOc1_02021 | Not Available | Negative | 2195165 - 2196058 | 32619.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
