Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish 1 | BerOc1_01982 | Not Available | Negative | 2148945 - 2149565 | 22650.4 |
| asparagine synthetase | BerOc1_01983 | Not Available | Negative | 2149569 - 2151449 | 70489.9 |
| hypothetical protein | BerOc1_01984 | Not Available | Negative | 2151449 - 2152762 | 48900.0 |
| aminoglycoside 3-n-acetyltransferase | BerOc1_01985 | Not Available | Negative | 2152762 - 2153544 | 28213.2 |
| d-alanine--poly(phosphoribitol) ligase subunit 2 | BerOc1_01986 | Not Available | Negative | 2153531 - 2153800 | 10037.9 |
| putative sulfoacetate--coa ligase | BerOc1_01987 | Not Available | Negative | 2153810 - 2156035 | 80090.4 |
| 4-hydroxy-2-oxovalerate aldolase | BerOc1_01988 | Not Available | Negative | 2156032 - 2157876 | 65188.6 |
| capsule polysaccharide biosynthesis protein | BerOc1_01989 | Not Available | Negative | 2157880 - 2159457 | 58007.0 |
| cyclic pyranopterin monophosphate synthase | BerOc1_01990 | Not Available | Negative | 2159496 - 2160581 | 41085.3 |
| hypothetical protein | BerOc1_01991 | Not Available | Negative | 2160597 - 2161289 | 26573.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
