Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_01962 | Not Available | Negative | 2128558 - 2129364 | 29760.4 |
| hypothetical protein | BerOc1_01963 | Not Available | Positive | 2129587 - 2129868 | 10647.6 |
| endonuclease 4 | BerOc1_01964 | Not Available | Positive | 2129885 - 2130730 | 31575.6 |
| phosphoglycolate phosphatase | BerOc1_01965 | Not Available | Positive | 2130907 - 2131572 | 24322.4 |
| epimerase family protein | BerOc1_01966 | Not Available | Negative | 2131993 - 2132895 | 32688.7 |
| sensor protein kinase walk | BerOc1_01967 | Not Available | Negative | 2133061 - 2135253 | 81681.1 |
| hypothetical protein | BerOc1_01968 | Not Available | Negative | 2135268 - 2135855 | 21931.2 |
| universal stress protein family protein | BerOc1_01969 | Not Available | Positive | 2135972 - 2136856 | 33238.8 |
| hypothetical protein | BerOc1_01970 | Not Available | Negative | 2136883 - 2138598 | 64455.0 |
| d-inositol-3-phosphate glycosyltransferase | BerOc1_01971 | Not Available | Negative | 2138617 - 2139846 | 43803.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
