Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane lipoprotein tmpc precursor | BerOc1_01932 | Not Available | Negative | 2099791 - 2100783 | 35970.6 |
| hth-type transcriptional activator cmpr | BerOc1_01933 | Not Available | Negative | 2101070 - 2101999 | 34483.5 |
| cyth domain protein | BerOc1_01934 | Not Available | Positive | 2102119 - 2102583 | 17747.9 |
| hypothetical protein | BerOc1_01935 | Not Available | Positive | 2102604 - 2103239 | 23431.1 |
| sodium-dependent dicarboxylate transporter sdcs | BerOc1_01936 | Not Available | Positive | 2103328 - 2104905 | 57043.3 |
| hypothetical protein | BerOc1_01937 | Not Available | Positive | 2105067 - 2105717 | 24476.4 |
| sulfate permease cysp | BerOc1_01938 | Not Available | Positive | 2105730 - 2107031 | 45595.2 |
| putative ammonia monooxygenase | BerOc1_01939 | Not Available | Positive | 2107373 - 2107846 | 16555.4 |
| nmra-like family protein | BerOc1_01940 | Not Available | Negative | 2108011 - 2108622 | 21813.1 |
| putative hth-type transcriptional regulator yybr | BerOc1_01941 | Not Available | Positive | 2108760 - 2109134 | 14557.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
