Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_01922 | Not Available | Negative | 2088153 - 2089979 | 63245.9 |
| chloramphenicol acetyltransferase | BerOc1_01923 | Not Available | Positive | 2090283 - 2090909 | 23909.2 |
| phosphopentomutase | BerOc1_01924 | Not Available | Negative | 2091078 - 2092298 | 43424.7 |
| thymidine phosphorylase | BerOc1_01925 | Not Available | Negative | 2092298 - 2093644 | 47015.6 |
| deoxyribose-phosphate aldolase | BerOc1_01926 | Not Available | Negative | 2093799 - 2094584 | 27801.6 |
| cytidine deaminase | BerOc1_01927 | Not Available | Negative | 2094587 - 2094991 | 13996.8 |
| l-arabinose transporter permease protein | BerOc1_01928 | Not Available | Negative | 2094992 - 2095966 | 33851.5 |
| d-allose transporter subunit | BerOc1_01929 | Not Available | Negative | 2095963 - 2097060 | 39153.7 |
| ribose import atp-binding protein rbsa | BerOc1_01930 | Not Available | Negative | 2097061 - 2098629 | 56340.6 |
| membrane lipoprotein tmpc precursor | BerOc1_01931 | Not Available | Negative | 2098631 - 2099620 | 35996.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
