Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma f factor | BerOc1_01862 | Not Available | Negative | 2031982 - 2033487 | 55469.5 |
| leucine efflux protein | BerOc1_01863 | Not Available | Negative | 2033651 - 2034283 | 22625.7 |
| putative diguanylate cyclase ydam | BerOc1_01864 | Not Available | Negative | 2034451 - 2036322 | 69930.8 |
| putative n-acetyltransferase yjab | BerOc1_01865 | Not Available | Negative | 2036509 - 2037147 | 23649.7 |
| methyl-accepting chemotaxis protein pcta | BerOc1_01866 | Not Available | Positive | 2037306 - 2038859 | 54765.2 |
| competence protein comm | BerOc1_01867 | Not Available | Positive | 2039056 - 2040114 | 37291.4 |
| tyrosine recombinase xerc | BerOc1_01868 | Not Available | Negative | 2040309 - 2041268 | 35620.6 |
| hypothetical protein | BerOc1_01869 | Not Available | Positive | 2042084 - 2042572 | 18322.1 |
| dna adenine methyltransferase yhdj | BerOc1_01870 | Not Available | Positive | 2042569 - 2043297 | 27714.9 |
| molybdenum-pterin-binding protein mopa | BerOc1_01871 | Not Available | Negative | 2043454 - 2044515 | 39335.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
