Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid trap transporter permease protein siat | BerOc1_00151 | Not Available | Positive | 150435 - 151724 | 45273.1 |
| hypothetical protein | BerOc1_00152 | Not Available | Negative | 151841 - 152173 | 12162.7 |
| formate dehydrogenase subunit alpha precursor | BerOc1_00153 | Not Available | Positive | 152737 - 155778 | 113637.0 |
| formate dehydrogenase subunit beta | BerOc1_00154 | Not Available | Positive | 155790 - 156524 | 27654.2 |
| protein fdhd | BerOc1_00155 | Not Available | Positive | 156638 - 157432 | 28275.2 |
| methyl-accepting chemotaxis protein iii | BerOc1_00156 | Not Available | Positive | 157596 - 159647 | 74359.3 |
| hypothetical protein | BerOc1_00157 | Not Available | Positive | 160003 - 161049 | 38636.8 |
| beta-lactamase hydrolase-like protein | BerOc1_00158 | Not Available | Positive | 161127 - 162509 | 50747.3 |
| pyruvate-flavodoxin oxidoreductase | BerOc1_00159 | Not Available | Positive | 162891 - 166397 | 127074.0 |
| ykof-related family protein | BerOc1_00160 | Not Available | Positive | 166656 - 166958 | 11046.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
