Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate oxidoreductase subunit korb | BerOc1_01832 | Not Available | Positive | 1998590 - 1999360 | 27726.4 |
| pyruvate synthase subunit porc | BerOc1_01833 | Not Available | Positive | 1999360 - 1999902 | 19146.5 |
| putative deoxyribonuclease rhsb | BerOc1_01834 | Not Available | Positive | 2000474 - 2001796 | 48604.7 |
| hypothetical protein | BerOc1_01835 | Not Available | Negative | 2002584 - 2003753 | 42808.4 |
| chromosomal replication initiator protein dnaa | BerOc1_01836 | Not Available | Positive | 2004123 - 2005421 | 50385.5 |
| dna polymerase iii subunit beta | BerOc1_01837 | Not Available | Positive | 2005569 - 2006738 | 44002.9 |
| dna gyrase subunit b | BerOc1_01838 | Not Available | Positive | 2006739 - 2009132 | 90526.2 |
| dna gyrase subunit a | BerOc1_01839 | Not Available | Positive | 2009321 - 2011768 | 91022.2 |
| tetratricopeptide repeat protein | BerOc1_01840 | Not Available | Positive | 2011774 - 2012598 | 30621.3 |
| gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase | BerOc1_01841 | Not Available | Positive | 2012671 - 2013783 | 40391.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
