Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-acylglucosamine n-acyltransferase | BerOc1_00141 | Not Available | Negative | 139223 - 140263 | 35609.1 |
| outer membrane protein (omph-like) | BerOc1_00142 | Not Available | Negative | 140267 - 140782 | 19471.6 |
| outer membrane protein assembly factor bama precursor | BerOc1_00143 | Not Available | Negative | 140819 - 143539 | 100561.0 |
| lipoprotein-releasing system atp-binding protein lold | BerOc1_00144 | Not Available | Negative | 143529 - 144212 | 24853.2 |
| lipoprotein-releasing system transmembrane protein lole | BerOc1_00145 | Not Available | Negative | 144205 - 145434 | 44279.6 |
| lysine--trna ligase | BerOc1_00146 | Not Available | Negative | 145440 - 146954 | 57870.3 |
| Trna-asn | Not Available | Not Available | Positive | 147226 - 147301 | Not Available |
| putative amino-acid-binding protein yxem precursor | BerOc1_00148 | Not Available | Positive | 147561 - 148331 | 29544.7 |
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | BerOc1_00149 | Not Available | Positive | 148780 - 149847 | 39600.0 |
| 2,3-diketo-l-gulonate trap transporter small permease protein yiam | BerOc1_00150 | Not Available | Positive | 149951 - 150430 | 18224.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
