Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative butyrate kinase 2 | BerOc1_01741 | Not Available | Positive | 1904605 - 1905690 | 38832.1 |
| chemotaxis protein methyltransferase cher2 | BerOc1_01742 | Not Available | Positive | 1905796 - 1906668 | 33890.9 |
| hdod domain protein | BerOc1_01743 | Not Available | Positive | 1906672 - 1907892 | 45049.4 |
| fumarate hydratase class ii | BerOc1_01744 | Not Available | Positive | 1908396 - 1909784 | 49507.8 |
| homoserine/homoserine lactone efflux protein | BerOc1_01745 | Not Available | Negative | 1909781 - 1910374 | 21079.6 |
| putative hth-type transcriptional regulator ydcr | BerOc1_01746 | Not Available | Positive | 1910483 - 1911847 | 49273.7 |
| kynurenine formamidase | BerOc1_01747 | Not Available | Negative | 1911861 - 1912496 | 22813.1 |
| pp_01720 | BerOc1_01748 | Not Available | Negative | 1912509 - 1913555 | Not Available |
| hypothetical protein | BerOc1_01749 | Not Available | Positive | 1913812 - 1914645 | 30443.0 |
| hypothetical protein | BerOc1_01750 | Not Available | Positive | 1914689 - 1914934 | 8428.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
