Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic di-gmp phosphodiesterase response regulator rpfg | BerOc1_01711 | Not Available | Negative | 1874400 - 1875380 | 36984.5 |
| putative abc transporter arginine-binding protein 2 precursor | BerOc1_01712 | Not Available | Positive | 1875590 - 1876351 | 27866.9 |
| glutamate racemase | BerOc1_01713 | Not Available | Negative | 1876761 - 1877600 | 29497.7 |
| cyclic-di-gmp phosphodiesterase | BerOc1_01714 | Not Available | Negative | 1877712 - 1878962 | 46329.9 |
| hypothetical protein | BerOc1_01715 | Not Available | Negative | 1879015 - 1879926 | 35016.6 |
| cyclic di-gmp phosphodiesterase response regulator rpfg | BerOc1_01716 | Not Available | Negative | 1879930 - 1881168 | 45994.9 |
| cupin domain protein | BerOc1_01717 | Not Available | Negative | 1881280 - 1881627 | 12567.1 |
| hydroxylamine reductase | BerOc1_01718 | Not Available | Negative | 1881956 - 1883563 | 57215.9 |
| putative isomerase ydde | BerOc1_01719 | Not Available | Positive | 1883724 - 1884665 | 32428.0 |
| hypothetical protein | BerOc1_01720 | Not Available | Positive | 1884684 - 1885370 | 25072.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
