Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase d | BerOc1_01571 | Not Available | Positive | 1715278 - 1717179 | 69746.4 |
| demethylrebeccamycin-d-glucose o-methyltransferase | BerOc1_01572 | Not Available | Negative | 1717441 - 1718010 | 21175.1 |
| periplasmic ph-dependent serine endoprotease degq precursor | BerOc1_01573 | Not Available | Negative | 1718100 - 1719425 | 47150.9 |
| hypothetical protein | BerOc1_01574 | Not Available | Negative | 1719427 - 1720272 | 29925.8 |
| 6-phosphofructokinase 1 | BerOc1_01575 | Not Available | Positive | 1720497 - 1721837 | 48153.8 |
| cytochrome bd-i ubiquinol oxidase subunit 1 | BerOc1_01576 | Not Available | Positive | 1721941 - 1723254 | 48424.6 |
| cytochrome bd-i ubiquinol oxidase subunit 2 | BerOc1_01577 | Not Available | Positive | 1723280 - 1724329 | 38244.4 |
| 2,3-diketo-l-gulonate trap transporter small permease protein yiam | BerOc1_01578 | Not Available | Positive | 1724704 - 1725270 | 20721.7 |
| sialic acid trap transporter permease protein siat | BerOc1_01579 | Not Available | Positive | 1725271 - 1726593 | 47561.7 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | BerOc1_01580 | Not Available | Positive | 1726795 - 1728783 | 71403.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
