Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein p6 precursor | BerOc1_00121 | Not Available | Negative | 119756 - 120313 | 20463.1 |
| protein tolb | BerOc1_00122 | Not Available | Negative | 120434 - 121741 | 47568.7 |
| transport protein tonb | BerOc1_00123 | Not Available | Negative | 121747 - 122670 | 33511.2 |
| biopolymer transport protein exbd | BerOc1_00124 | Not Available | Negative | 122692 - 123108 | 15369.0 |
| biopolymer transport protein exbb | BerOc1_00125 | Not Available | Negative | 123118 - 123822 | 25578.5 |
| phosphatase ycdx | BerOc1_00126 | Not Available | Negative | 123962 - 124612 | 23399.2 |
| hypothetical protein | BerOc1_00127 | Not Available | Negative | 124620 - 125114 | 18037.7 |
| (dimethylallyl)adenosine trna methylthiotransferase miab | BerOc1_00128 | Not Available | Negative | 125108 - 126454 | 49635.3 |
| putative bifunctional sat/aps kinase | BerOc1_00129 | Not Available | Negative | 126529 - 127116 | 22014.1 |
| phosphotransferase enzyme family protein | BerOc1_00130 | Not Available | Negative | 127119 - 128201 | 41743.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
