Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase rimo | BerOc1_01541 | Not Available | Positive | 1676746 - 1678074 | 48075.4 |
| serine--trna ligase | BerOc1_01542 | Not Available | Negative | 1678932 - 1680209 | 48111.5 |
| cytidylate kinase | BerOc1_01543 | Not Available | Negative | 1680252 - 1680911 | 23881.6 |
| histidinol-phosphate aminotransferase | BerOc1_01544 | Not Available | Negative | 1680904 - 1682004 | 40303.8 |
| universal stress protein | BerOc1_01545 | Not Available | Negative | 1682386 - 1682826 | 15755.2 |
| hypothetical protein | BerOc1_01546 | Not Available | Positive | 1683103 - 1683573 | 16755.4 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | BerOc1_01547 | Not Available | Negative | 1684060 - 1684782 | 26144.3 |
| high-affinity branched-chain amino acid transport system permease protein livh | BerOc1_01548 | Not Available | Negative | 1685073 - 1686263 | 43173.2 |
| high-affinity branched-chain amino acid transport system permease protein livh | BerOc1_01549 | Not Available | Negative | 1686244 - 1687146 | 31643.6 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor | BerOc1_01550 | Not Available | Negative | 1687208 - 1688359 | 40896.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
