Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_01521 | Not Available | Negative | 1655120 - 1655527 | 14776.5 |
| hypothetical protein | BerOc1_01522 | Not Available | Positive | 1655729 - 1656187 | 17112.5 |
| putative diguanylate cyclase ydam | BerOc1_01523 | Not Available | Positive | 1656207 - 1656992 | 28885.3 |
| cyclic di-gmp phosphodiesterase gmr | BerOc1_01524 | Not Available | Positive | 1657117 - 1659603 | 94237.2 |
| trna (cytidine/uridine-2'-o-)-methyltransferase trmj | BerOc1_01525 | Not Available | Negative | 1659694 - 1660452 | 27734.5 |
| nmt1/thi5 like protein | BerOc1_01526 | Not Available | Positive | 1660775 - 1661743 | 34442.1 |
| sialic acid trap transporter permease protein siat | BerOc1_01527 | Not Available | Positive | 1661963 - 1663891 | 69720.7 |
| hypothetical protein | BerOc1_01528 | Not Available | Positive | 1665240 - 1666259 | 36344.7 |
| nadp-dependent malic enzyme | BerOc1_01529 | Not Available | Positive | 1666535 - 1667854 | 47619.5 |
| acyl carrier protein | BerOc1_01530 | Not Available | Positive | 1668039 - 1668281 | 9453.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
