Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_01511 | Not Available | Negative | 1645156 - 1645614 | 16247.3 |
| 2-dehydro-3-deoxygluconokinase | BerOc1_01512 | Not Available | Negative | 1645820 - 1646698 | 31011.2 |
| tetratricopeptide repeat protein | BerOc1_01513 | Not Available | Negative | 1646701 - 1648050 | 48355.3 |
| flagellar hook protein flge | BerOc1_01514 | Not Available | Negative | 1648180 - 1649781 | 56763.2 |
| outer membrane protein (omph-like) | BerOc1_01515 | Not Available | Positive | 1650119 - 1650682 | 20165.3 |
| hpt domain protein | BerOc1_01516 | Not Available | Negative | 1650742 - 1651101 | 13165.7 |
| hypothetical protein | BerOc1_01517 | Not Available | Negative | 1651204 - 1652466 | 44539.0 |
| hypothetical protein | BerOc1_01518 | Not Available | Positive | 1652766 - 1653260 | 18876.3 |
| coenzyme f420:l-glutamate ligase | BerOc1_01519 | Not Available | Negative | 1653673 - 1654479 | 29116.2 |
| hypothetical protein | BerOc1_01520 | Not Available | Negative | 1654540 - 1655106 | 20231.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
