Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase gamma subunit | BerOc1_01491 | Not Available | Negative | 1618012 - 1619058 | 39350.5 |
| hypothetical protein | BerOc1_01492 | Not Available | Negative | 1619256 - 1619783 | 20372.6 |
| putative diguanylate cyclase ydam | BerOc1_01493 | Not Available | Negative | 1620019 - 1622595 | 95395.9 |
| trna (adenine(58)-n(1))-methyltransferase trmi | BerOc1_01494 | Not Available | Negative | 1622904 - 1623779 | 32023.6 |
| alkaline phosphatase synthesis sensor protein phor | BerOc1_01495 | Not Available | Negative | 1623850 - 1625694 | 68132.4 |
| cyclic pyranopterin monophosphate synthase | BerOc1_01496 | Not Available | Positive | 1625866 - 1626819 | 34724.9 |
| ribonuclease e | BerOc1_01497 | Not Available | Positive | 1626867 - 1628333 | 55555.9 |
| non-motile and phage-resistance protein | BerOc1_01498 | Not Available | Negative | 1628928 - 1630859 | 73412.1 |
| putative amino-acid-binding protein yxem precursor | BerOc1_01499 | Not Available | Negative | 1630953 - 1631591 | 23250.4 |
| nickel/cobalt efflux protein rcna | BerOc1_01500 | Not Available | Positive | 1631817 - 1633262 | 51003.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
