Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucokinase | BerOc1_00111 | Not Available | Negative | 112006 - 112968 | 34270.5 |
| chemotaxis protein poma | BerOc1_00112 | Not Available | Negative | 113076 - 113963 | 32072.1 |
| motility protein b | BerOc1_00113 | Not Available | Negative | 113980 - 114702 | 26131.1 |
| maf-like protein yhde | BerOc1_00114 | Not Available | Positive | 114889 - 115524 | 22272.0 |
| udp-glc:alpha-d-glcnac-diphosphoundecaprenol beta-1,3-glucosyltransferase wfgd | BerOc1_00115 | Not Available | Positive | 115517 - 116410 | 34546.0 |
| dinb superfamily protein | BerOc1_00116 | Not Available | Positive | 116477 - 117100 | 23929.1 |
| acetyltransferase (gnat) family protein | BerOc1_00117 | Not Available | Positive | 117149 - 117571 | 15258.3 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | BerOc1_00118 | Not Available | Negative | 117594 - 118163 | 20208.2 |
| putative phosphinothricin acetyltransferase ywnh | BerOc1_00119 | Not Available | Negative | 118240 - 118728 | 18338.0 |
| phosphatidylglycerophosphatase a | BerOc1_00120 | Not Available | Positive | 118937 - 119422 | 17223.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
