Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative diguanylate cyclase ycdt | BerOc1_01424 | Not Available | Positive | 1549341 - 1550060 | 27469.4 |
| hypothetical protein | BerOc1_01425 | Not Available | Negative | 1550075 - 1550470 | 14689.6 |
| endonuclease/exonuclease/phosphatase family protein | BerOc1_01426 | Not Available | Negative | 1550535 - 1551545 | 36485.6 |
| cobalt-precorrin-4 c(11)-methyltransferase | BerOc1_01427 | Not Available | Negative | 1551642 - 1552403 | 26480.9 |
| exodeoxyribonuclease 10 | BerOc1_01428 | Not Available | Negative | 1552403 - 1552939 | 19808.7 |
| phosphoribosylglycinamide formyltransferase | BerOc1_01429 | Not Available | Negative | 1553235 - 1553939 | 25351.7 |
| bacterial extracellular solute-binding protein, family 3 | BerOc1_01430 | Not Available | Positive | 1554116 - 1554856 | 27742.1 |
| hypothetical protein | BerOc1_01431 | Not Available | Positive | 1555014 - 1555343 | 11731.9 |
| uroporphyrinogen-iii c-methyltransferase | BerOc1_01432 | Not Available | Negative | 1555419 - 1556933 | 54518.4 |
| valine--trna ligase | BerOc1_01433 | Not Available | Negative | 1557075 - 1559741 | 100717.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
