Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_01394 | Not Available | Positive | 1519892 - 1521337 | 52753.7 |
| putative transporter | BerOc1_01395 | Not Available | Positive | 1521491 - 1522675 | 40964.0 |
| nifu-like protein | BerOc1_01396 | Not Available | Negative | 1522693 - 1523145 | 16009.4 |
| hypothetical protein | BerOc1_01397 | Not Available | Negative | 1523516 - 1524907 | 49455.0 |
| cytochrome c3 | BerOc1_01398 | Not Available | Negative | 1524979 - 1525386 | 14185.4 |
| cobalt-precorrin-3b c(17)-methyltransferase | BerOc1_01399 | Not Available | Negative | 1525554 - 1526300 | 26860.9 |
| cobalamin biosynthesis protein cbig | BerOc1_01400 | Not Available | Negative | 1526293 - 1527330 | 36694.1 |
| glutamate-1-semialdehyde 2,1-aminomutase 1 | BerOc1_01401 | Not Available | Negative | 1527473 - 1528732 | 44629.6 |
| hypothetical protein | BerOc1_01402 | Not Available | Negative | 1528743 - 1529219 | 17960.4 |
| methyl-accepting chemotaxis protein i | BerOc1_01403 | Not Available | Negative | 1529295 - 1531337 | 71946.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
