Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | BerOc1_01384 | Not Available | Negative | 1511330 - 1511917 | 21743.9 |
| hypothetical protein | BerOc1_01385 | Not Available | Negative | 1512062 - 1512295 | 8500.41 |
| 30s ribosomal protein s16 | BerOc1_01386 | Not Available | Negative | 1512406 - 1512645 | 9087.26 |
| signal recognition particle protein | BerOc1_01387 | Not Available | Negative | 1512734 - 1514263 | 55962.1 |
| voltage-gated potassium channel | BerOc1_01388 | Not Available | Positive | 1514603 - 1515361 | 27454.1 |
| putative electron transport protein yccm | BerOc1_01389 | Not Available | Positive | 1515473 - 1516447 | 35469.1 |
| rna polymerase-binding transcription factor dksa | BerOc1_01390 | Not Available | Negative | 1516451 - 1516786 | 12514.1 |
| putative n-succinyldiaminopimelate aminotransferase dapc | BerOc1_01391 | Not Available | Negative | 1516783 - 1517940 | 41649.1 |
| 4-formylbenzenesulfonate dehydrogenase tsac1/tsac2 | BerOc1_01392 | Not Available | Positive | 1517995 - 1518744 | 26223.6 |
| homoserine kinase | BerOc1_01393 | Not Available | Positive | 1518951 - 1519892 | 34987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
