Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | BerOc1_01314 | Not Available | Negative | 1442627 - 1444288 | 58832.1 |
| hypothetical protein | BerOc1_01315 | Not Available | Positive | 1444455 - 1445126 | 24576.3 |
| nadh peroxidase | BerOc1_01316 | Not Available | Negative | 1445275 - 1446975 | 60036.3 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | BerOc1_01317 | Not Available | Negative | 1447266 - 1448012 | 26081.5 |
| hydrogenase nickel incorporation protein hypa | BerOc1_01318 | Not Available | Positive | 1448500 - 1448856 | 13025.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | BerOc1_01319 | Not Available | Positive | 1448870 - 1449529 | 24561.6 |
| alpha/beta hydrolase family protein | BerOc1_01320 | Not Available | Positive | 1449646 - 1450653 | 36927.0 |
| nitrogen fixation protein vnfa | BerOc1_01321 | Not Available | Positive | 1450740 - 1452071 | 48993.6 |
| hypothetical protein | BerOc1_01322 | Not Available | Positive | 1452230 - 1452580 | 12551.2 |
| septum site-determining protein mind | BerOc1_01323 | Not Available | Positive | 1452692 - 1453567 | 30581.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
