Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin synthase | BerOc1_01304 | Not Available | Positive | 1430065 - 1430796 | 25914.3 |
| ef hand | BerOc1_01305 | Not Available | Positive | 1430938 - 1431462 | 18266.4 |
| putative signal peptide peptidase sppa | BerOc1_01306 | Not Available | Positive | 1431583 - 1432566 | 35247.6 |
| inner membrane transport permease ybhr | BerOc1_01307 | Not Available | Negative | 1432655 - 1433767 | 40716.0 |
| inner membrane transport permease ybhs | BerOc1_01308 | Not Available | Negative | 1433772 - 1434911 | 41920.6 |
| putative abc transporter atp-binding protein ybhf | BerOc1_01309 | Not Available | Negative | 1434914 - 1436656 | 63133.0 |
| macrolide export protein maca | BerOc1_01310 | Not Available | Negative | 1436659 - 1437681 | 37759.1 |
| transcriptional repressor mpra | BerOc1_01311 | Not Available | Negative | 1437741 - 1438238 | 18622.0 |
| aspartate aminotransferase | BerOc1_01312 | Not Available | Positive | 1438401 - 1439591 | 43296.3 |
| methyl-accepting chemotaxis protein iii | BerOc1_01313 | Not Available | Negative | 1440124 - 1442007 | 66968.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
