Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | BerOc1_01264 | Not Available | Negative | 1384114 - 1385058 | 34698.2 |
| zinc ribbon domain protein | BerOc1_01265 | Not Available | Positive | 1385298 - 1385543 | 8161.48 |
| porphobilinogen deaminase | BerOc1_01266 | Not Available | Positive | 1385593 - 1386525 | 33522.6 |
| hypothetical protein | BerOc1_01267 | Not Available | Positive | 1386707 - 1386904 | 7137.52 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | BerOc1_01268 | Not Available | Negative | 1387225 - 1388292 | 36567.1 |
| hypothetical protein | BerOc1_01269 | Not Available | Positive | 1388442 - 1389269 | 31212.2 |
| hypothetical protein | BerOc1_01270 | Not Available | Positive | 1389589 - 1389945 | 13143.6 |
| metal binding domain of ada | BerOc1_01271 | Not Available | Negative | 1389949 - 1390200 | 9164.29 |
| hypothetical protein | BerOc1_01272 | Not Available | Negative | 1390296 - 1390898 | 22875.0 |
| shikimate kinase | BerOc1_01273 | Not Available | Negative | 1390895 - 1391431 | 19481.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
